MBG wiki | RecentChanges | Blog | 2021-10-20 | 2021-10-19

φ,ψ time series

Difference (from prior major revision)

Changed: 2c2

< <source>

to

> <code>

Changed: 16,17c16,17

< </source>
< <source>

to

> </code>
> <code>

Changed: 31c31

< </source>

to

> </code>


xplor it is :

structure @native.psf end

dynamics analysis
    pick dihedral 
   ( residue 19 and name c  and segid="A   ")
   ( residue 20 and name n  and segid="A   ") 
   ( residue 20 and name ca and segid="A   ") 
   ( residue 20 and name c  and segid="A   ")  geometry

  asci=false
  input=fitted.dcd
  begin=0 skip=1 stop=2000000

  output=phi_20A.list

end

stop

structure @native.psf end

dynamics analysis
    pick dihedral 
   ( residue 36 and name n   and segid="A   ")
   ( residue 36 and name ca  and segid="A   ") 
   ( residue 36 and name c   and segid="A   ")
   ( residue 37 and name n   and segid="A   ")  geometry

  asci=false
  input=fitted.dcd
  begin=0 skip=1 stop=2000000

  output=psi_36A.list

end

stop