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Calculation of rmsd from the starting structure
If you've used /carma/ to remove translations-rotations, then you already have seen a plot of the evolution . . . BC.dat A.dat giving something like : [[image: Calculation of rmsd from the starting structure (xmgr)]] . . .
2K - last updated 2005-06-30 13:02 UTC by glykos

Tools and methods for analysing MD simulations
Please add other analyses, other methods/programs for performing the same task, etc. * [[Quick view of . . . using selected atoms for fitting]] * [[Calculation of rmsd from the starting structure]] * . . .
2K - last updated 2007-02-05 10:15 UTC by server.cluster.mbg.gr

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