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Calculation of the average Cα-Cα distance map and the corresponding rmsd
/carma/ it is : carma -v -rms -mrms 2.0 fitted.dcd native.psf The *mrms* flag tells /carma/ to draw . . .
1K - last updated 2005-03-05 11:13 UTC by NMG

Tools and methods for analysing MD simulations
Please add other analyses, other methods/programs for performing the same task, etc. * [[Quick view of . . . of the evolution of the radius of gyration]] * [[Calculation of the average Cα-Cα distance map and . . . the corresponding rmsd]] * [[Calculation of frame-to-frame . . .
2K - last updated 2007-02-05 10:15 UTC by server.cluster.mbg.gr

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